Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.34■□□□□ 0.21
UBFD1O14562 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.34■□□□□ 0.21
UBFD1O14562 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
UBFD1O14562 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
UBFD1O14562 GGT4P-201ENST00000623672 1708 ntBASIC16.33■□□□□ 0.21
UBFD1O14562 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.33■□□□□ 0.21
UBFD1O14562 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBFD1O14562 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBFD1O14562 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBFD1O14562 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBFD1O14562 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
UBFD1O14562 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
UBFD1O14562 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.33■□□□□ 0.2
UBFD1O14562 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.33■□□□□ 0.2
UBFD1O14562 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.33■□□□□ 0.2
UBFD1O14562 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.33■□□□□ 0.2
UBFD1O14562 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UBFD1O14562 SART3-203ENST00000546611 1184 ntBASIC16.33■□□□□ 0.2
UBFD1O14562 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
UBFD1O14562 MPDU1-223ENST00000582151 728 ntBASIC16.33■□□□□ 0.2
UBFD1O14562 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 REXO1L3P-201ENST00000622202 1288 ntBASIC16.33■□□□□ 0.2
UBFD1O14562 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.33■□□□□ 0.2
UBFD1O14562 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.33■□□□□ 0.2
UBFD1O14562 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 AC002310.6-201ENST00000624451 1377 ntBASIC16.33■□□□□ 0.2
UBFD1O14562 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.33■□□□□ 0.2
UBFD1O14562 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.33■□□□□ 0.2
UBFD1O14562 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.33■□□□□ 0.2
UBFD1O14562 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
UBFD1O14562 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
UBFD1O14562 AL031731.1-201ENST00000642131 2094 ntBASIC16.33■□□□□ 0.2
UBFD1O14562 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.33■□□□□ 0.2
UBFD1O14562 AC024909.3-201ENST00000611513 2257 ntBASIC16.33■□□□□ 0.2
UBFD1O14562 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.33■□□□□ 0.2
UBFD1O14562 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
UBFD1O14562 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.32■□□□□ 0.2
UBFD1O14562 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.32■□□□□ 0.2
UBFD1O14562 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
UBFD1O14562 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
UBFD1O14562 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.32■□□□□ 0.2
UBFD1O14562 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 AL596087.1-201ENST00000400979 1969 ntBASIC16.32■□□□□ 0.2
UBFD1O14562 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.32■□□□□ 0.2
UBFD1O14562 AC087163.2-201ENST00000457299 853 ntBASIC16.32■□□□□ 0.2
UBFD1O14562 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
UBFD1O14562 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.32■□□□□ 0.2
UBFD1O14562 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.32■□□□□ 0.2
UBFD1O14562 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.32■□□□□ 0.2
UBFD1O14562 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.32■□□□□ 0.2
UBFD1O14562 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.32■□□□□ 0.2
UBFD1O14562 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.32■□□□□ 0.2
UBFD1O14562 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.32■□□□□ 0.2
UBFD1O14562 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.32■□□□□ 0.2
UBFD1O14562 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.32■□□□□ 0.2
UBFD1O14562 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.32■□□□□ 0.2
UBFD1O14562 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.32■□□□□ 0.2
UBFD1O14562 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.32■□□□□ 0.2
UBFD1O14562 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
UBFD1O14562 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBFD1O14562 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
UBFD1O14562 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
UBFD1O14562 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.31■□□□□ 0.2
UBFD1O14562 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
UBFD1O14562 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.31■□□□□ 0.2
UBFD1O14562 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms