Protein–RNA interactions for Protein: O00339

MATN2, Matrilin-2, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN2O00339 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MATN2O00339 AL022342.1-201ENST00000400363 863 ntBASIC16.81■□□□□ 0.28
MATN2O00339 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.81■□□□□ 0.28
MATN2O00339 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.81■□□□□ 0.28
MATN2O00339 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.81■□□□□ 0.28
MATN2O00339 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.81■□□□□ 0.28
MATN2O00339 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.81■□□□□ 0.28
MATN2O00339 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.81■□□□□ 0.28
MATN2O00339 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.81■□□□□ 0.28
MATN2O00339 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.81■□□□□ 0.28
MATN2O00339 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MATN2O00339 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MATN2O00339 AL662844.4-201ENST00000606367 2838 ntBASIC16.81■□□□□ 0.28
MATN2O00339 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
MATN2O00339 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MATN2O00339 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 AC148477.5-201ENST00000625164 1645 ntBASIC16.81■□□□□ 0.28
MATN2O00339 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MATN2O00339 AC008741.2-201ENST00000612792 3115 ntBASIC16.81■□□□□ 0.28
MATN2O00339 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MATN2O00339 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
MATN2O00339 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MATN2O00339 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.8■□□□□ 0.28
MATN2O00339 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
MATN2O00339 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.8■□□□□ 0.28
MATN2O00339 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.8■□□□□ 0.28
MATN2O00339 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.8■□□□□ 0.28
MATN2O00339 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MATN2O00339 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.8■□□□□ 0.28
MATN2O00339 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.8■□□□□ 0.28
MATN2O00339 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
MATN2O00339 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.8■□□□□ 0.28
MATN2O00339 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MATN2O00339 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.8■□□□□ 0.28
MATN2O00339 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
MATN2O00339 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 FRMD8P1-201ENST00000440433 1524 ntBASIC16.8■□□□□ 0.28
MATN2O00339 AC079328.2-201ENST00000561241 3354 ntBASIC16.8■□□□□ 0.28
MATN2O00339 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MATN2O00339 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
MATN2O00339 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.79■□□□□ 0.28
MATN2O00339 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.79■□□□□ 0.28
MATN2O00339 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
MATN2O00339 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
MATN2O00339 AC243591.1-201ENST00000452967 1364 ntBASIC16.79■□□□□ 0.28
MATN2O00339 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
MATN2O00339 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.79■□□□□ 0.28
MATN2O00339 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.79■□□□□ 0.28
MATN2O00339 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.79■□□□□ 0.28
MATN2O00339 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.79■□□□□ 0.28
MATN2O00339 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.79■□□□□ 0.28
MATN2O00339 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.79■□□□□ 0.28
MATN2O00339 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.79■□□□□ 0.28
MATN2O00339 AC116407.3-201ENST00000623905 1129 ntBASIC16.79■□□□□ 0.28
MATN2O00339 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
MATN2O00339 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MATN2O00339 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.79■□□□□ 0.28
MATN2O00339 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.79■□□□□ 0.28
MATN2O00339 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.79■□□□□ 0.28
MATN2O00339 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
MATN2O00339 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
MATN2O00339 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
MATN2O00339 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.78■□□□□ 0.28
MATN2O00339 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
MATN2O00339 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
MATN2O00339 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms