Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CLCA1A8K7I4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 AL662844.4-201ENST00000606367 2838 ntBASIC15.78■□□□□ 0.12
CLCA1A8K7I4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 RNA5SP419-201ENST00000515908 135 ntBASIC15.78■□□□□ 0.12
CLCA1A8K7I4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 AC021087.4-201ENST00000563761 564 ntBASIC15.78■□□□□ 0.12
CLCA1A8K7I4 AD001527.2-201ENST00000622994 785 ntBASIC15.78■□□□□ 0.12
CLCA1A8K7I4 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.78■□□□□ 0.12
CLCA1A8K7I4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CLCA1A8K7I4 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 PMS2P1-201ENST00000431037 1228 ntBASIC15.77■□□□□ 0.12
CLCA1A8K7I4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.77■□□□□ 0.12
CLCA1A8K7I4 AC093909.1-201ENST00000504731 1122 ntBASIC15.77■□□□□ 0.12
CLCA1A8K7I4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms