Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01546A6NGU7 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 KRT8P39-201ENST00000396270 1433 ntBASIC11.86□□□□□ -0.51
LINC01546A6NGU7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 APTR-205ENST00000447009 902 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 RASA4DP-201ENST00000460726 1199 ntBASIC11.86□□□□□ -0.51
LINC01546A6NGU7 MDH2-205ENST00000461263 648 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AC128688.1-201ENST00000487626 519 ntBASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AC010654.1-201ENST00000615722 808 ntBASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AL359736.2-201ENST00000621992 437 ntBASIC11.86□□□□□ -0.51
LINC01546A6NGU7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.86□□□□□ -0.51
LINC01546A6NGU7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 AC132938.5-201ENST00000624980 1813 ntBASIC11.86□□□□□ -0.51
LINC01546A6NGU7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01546A6NGU7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 AC007191.1-201ENST00000623179 2995 ntBASIC11.85□□□□□ -0.51
LINC01546A6NGU7 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
LINC01546A6NGU7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms