Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 MST1L-201ENST00000442552 2185 ntBASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 ME2P1-201ENST00000426028 1970 ntBASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 AL645929.1-201ENST00000420084 975 ntBASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CLN6-204ENST00000564752 900 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 AC073592.5-201ENST00000624854 528 ntBASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CLN6-214ENST00000636314 442 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV5A0A0B4J249 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 AC091607.1-201ENST00000490318 1060 ntBASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 AD001527.2-201ENST00000622994 785 ntBASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV5A0A0B4J249 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.11□□□□□ -0.31
TRAV5A0A0B4J249 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms