Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 AC002347.1-201ENST00000569543 541 ntBASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 PCDHA12-202ENST00000613593 2588 ntBASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAI2Q9Y5P3 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 AL391256.1-201ENST00000443260 1855 ntBASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 AL513480.1-201ENST00000451731 511 ntBASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAI2Q9Y5P3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 AC006277.1-201ENST00000624348 1610 ntBASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 LINC00895-201ENST00000629028 1637 ntBASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
RAI2Q9Y5P3 AC131009.4-201ENST00000624048 1740 ntBASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 AP006288.1-201ENST00000446065 395 ntBASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 MIR4492-201ENST00000581627 80 ntBASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 MTDHP5-201ENST00000598980 586 ntBASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 RNF216P1-203ENST00000404404 2427 ntBASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RAI2Q9Y5P3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RAI2Q9Y5P3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RAI2Q9Y5P3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms