Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
AP4S1Q9Y587 AC073347.1-201ENST00000421633 2643 ntBASIC15.98■□□□□ 0.15
AP4S1Q9Y587 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 MIR1238-201ENST00000408483 83 ntBASIC15.97■□□□□ 0.15
AP4S1Q9Y587 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 ECEL1P2-202ENST00000465689 757 ntBASIC15.97■□□□□ 0.15
AP4S1Q9Y587 AC090192.1-201ENST00000517740 490 ntBASIC15.97■□□□□ 0.15
AP4S1Q9Y587 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 TK2-221ENST00000620035 5060 ntTSL 2 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 AL353692.3-201ENST00000407031 1396 ntBASIC15.97■□□□□ 0.15
AP4S1Q9Y587 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 AC067930.6-201ENST00000623257 4947 ntBASIC15.97■□□□□ 0.15
AP4S1Q9Y587 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.97■□□□□ 0.15
AP4S1Q9Y587 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 AL049757.1-201ENST00000616842 1596 ntBASIC15.96■□□□□ 0.15
AP4S1Q9Y587 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
AP4S1Q9Y587 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4S1Q9Y587 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4S1Q9Y587 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
AP4S1Q9Y587 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
AP4S1Q9Y587 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.95■□□□□ 0.14
AP4S1Q9Y587 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 LINC00895-201ENST00000629028 1637 ntBASIC15.95■□□□□ 0.14
AP4S1Q9Y587 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 IGHGP-201ENST00000390555 1178 ntBASIC15.95■□□□□ 0.14
AP4S1Q9Y587 AC007967.3-201ENST00000434308 558 ntBASIC15.95■□□□□ 0.14
AP4S1Q9Y587 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms