Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MESTP1-201ENST00000404287 994 ntBASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 MIR1238-201ENST00000408483 83 ntBASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 FITM1-202ENST00000559294 800 ntBASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 AC133561.5-201ENST00000635547 218 ntBASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 KRT8P47-201ENST00000604727 1398 ntBASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRCH1Q9Y2L9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 AC007292.2-201ENST00000593524 1812 ntBASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 AP005242.2-201ENST00000580065 1175 ntBASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LRCH1Q9Y2L9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 AL645728.1-201ENST00000366221 2101 ntBASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 ECEL1P3-201ENST00000427961 737 ntBASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 AC011506.1-201ENST00000474329 610 ntBASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRCH1Q9Y2L9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms