Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CTSFQ9UBX1 AL121761.2-201ENST00000598007 1648 ntBASIC15.83■□□□□ 0.12
CTSFQ9UBX1 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 RNU1-129P-201ENST00000384064 167 ntBASIC15.82■□□□□ 0.12
CTSFQ9UBX1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 AL671277.1-201ENST00000429656 993 ntBASIC15.82■□□□□ 0.12
CTSFQ9UBX1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 KRT8P48-201ENST00000515599 1220 ntBASIC15.82■□□□□ 0.12
CTSFQ9UBX1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 U1.21-201ENST00000580816 167 ntBASIC15.82■□□□□ 0.12
CTSFQ9UBX1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 AC004835.2-201ENST00000603762 682 ntBASIC15.82■□□□□ 0.12
CTSFQ9UBX1 AL031055.1-201ENST00000606362 631 ntBASIC15.82■□□□□ 0.12
CTSFQ9UBX1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 MST1L-201ENST00000442552 2185 ntBASIC15.82■□□□□ 0.12
CTSFQ9UBX1 AC108860.2-201ENST00000562760 2183 ntBASIC15.82■□□□□ 0.12
CTSFQ9UBX1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CTSFQ9UBX1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 AP001350.2-201ENST00000625104 1094 ntBASIC15.81■□□□□ 0.12
CTSFQ9UBX1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CTSFQ9UBX1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CTSFQ9UBX1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.8■□□□□ 0.12
CTSFQ9UBX1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms