Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 AC087499.1-201ENST00000418141 1075 ntBASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 TSPY22P-201ENST00000427496 604 ntBASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 TNRC18P2-201ENST00000417666 2714 ntBASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 CDC14C-201ENST00000428251 1719 ntBASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.34■□□□□ 0.69
LMBRD1Q9NUN5 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 AL031731.1-201ENST00000642131 2094 ntBASIC19.33■□□□□ 0.69
LMBRD1Q9NUN5 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 HOMER2P1-201ENST00000455653 964 ntBASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 OR6D1P-203ENST00000641209 4860 ntBASIC19.33■□□□□ 0.68
LMBRD1Q9NUN5 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 LINC02228-204ENST00000642115 2962 ntBASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 REXO1L8P-201ENST00000604378 1897 ntBASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 PPT1-215ENST00000641471 2368 ntBASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMBRD1Q9NUN5 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms