Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 Z92544.1-202ENST00000571933 1220 ntBASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 GMCL1P1-201ENST00000463439 1581 ntBASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 LINC01230-201ENST00000625222 3017 ntBASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
CDC42SE1Q9NRR8 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 MTMR9LP-203ENST00000426597 1545 ntBASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 AL928921.2-201ENST00000641325 2442 ntBASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 MEX3B-202ENST00000558133 4333 ntBASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 AC091951.1-201ENST00000512854 2465 ntBASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 MROH4P-201ENST00000431302 1578 ntBASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 BX324167.2-201ENST00000623717 3316 ntBASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms