Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS4Q9NQG7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.42■□□□□ 0.38
HPS4Q9NQG7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HPS4Q9NQG7 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
HPS4Q9NQG7 AC012569.1-201ENST00000591191 1524 ntBASIC17.42■□□□□ 0.38
HPS4Q9NQG7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 SPCS2P4-201ENST00000436160 681 ntBASIC17.41■□□□□ 0.38
HPS4Q9NQG7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HPS4Q9NQG7 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 AC099398.1-201ENST00000567919 2776 ntBASIC17.4■□□□□ 0.38
HPS4Q9NQG7 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 AL161645.1-201ENST00000622716 1255 ntBASIC17.4■□□□□ 0.38
HPS4Q9NQG7 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
HPS4Q9NQG7 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
HPS4Q9NQG7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
HPS4Q9NQG7 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
HPS4Q9NQG7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HPS4Q9NQG7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
HPS4Q9NQG7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 AC067863.1-201ENST00000494933 530 ntBASIC17.39■□□□□ 0.37
HPS4Q9NQG7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 LINC01225-203ENST00000563550 1244 ntBASIC17.39■□□□□ 0.37
HPS4Q9NQG7 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.39■□□□□ 0.37
HPS4Q9NQG7 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.39■□□□□ 0.37
HPS4Q9NQG7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms