Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A20Q9NP91 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 AC009053.2-201ENST00000563701 2365 ntBASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 AL031432.2-201ENST00000566714 459 ntBASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 AL928711.1-201ENST00000570165 459 ntBASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 SNX33P1-201ENST00000592116 1762 ntBASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 AC092919.2-201ENST00000623631 1645 ntBASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A20Q9NP91 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.14■□□□□ 0.18
SLC6A20Q9NP91 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC6A20Q9NP91 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 AL603756.1-201ENST00000606511 2163 ntBASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 MTDHP5-201ENST00000598980 586 ntBASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 TNRC18P3-201ENST00000441896 2691 ntBASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A20Q9NP91 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 AL671710.1-201ENST00000610245 2349 ntBASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 AC074386.1-202ENST00000463561 864 ntBASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC6A20Q9NP91 AP001350.2-201ENST00000625104 1094 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms