Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SLIRPQ9GZT3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 AC020658.6-201ENST00000623564 1870 ntBASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 AC139749.1-202ENST00000617529 3139 ntBASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 AC004263.2-201ENST00000617183 678 ntBASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 TMBIM7P-203ENST00000641617 1718 ntBASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 LINC00528-201ENST00000600723 2160 ntBASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SLIRPQ9GZT3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 LINC01101-201ENST00000622953 1884 ntBASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 MAP2K4P1-201ENST00000438453 1195 ntBASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SLIRPQ9GZT3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLIRPQ9GZT3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLIRPQ9GZT3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SLIRPQ9GZT3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SLIRPQ9GZT3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.8□□□□□ -0.04
SLIRPQ9GZT3 CICP23-201ENST00000605013 2741 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms