Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 AC025062.2-201ENST00000605477 670 ntBASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
UPF3BQ9BZI7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
UPF3BQ9BZI7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 AC021087.4-201ENST00000563761 564 ntBASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 AC139887.3-201ENST00000568585 713 ntBASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 AC004706.3-202ENST00000621574 984 ntBASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
UPF3BQ9BZI7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 AC006504.4-201ENST00000592118 1568 ntBASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 PTCHD3P3-201ENST00000403073 906 ntBASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 ELK2BP-201ENST00000415014 1224 ntBASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 PAWRP1-201ENST00000451083 565 ntBASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.09■□□□□ 0.81
UPF3BQ9BZI7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms