Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.17■□□□□ 0.18
THUMPD3Q9BV44 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD3Q9BV44 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD3Q9BV44 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
THUMPD3Q9BV44 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD3Q9BV44 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 KLF4P1-201ENST00000412782 1185 ntBASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 AC246785.2-201ENST00000432512 513 ntBASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 AC091607.1-201ENST00000490318 1060 ntBASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 NORAD-201ENST00000565493 5339 ntBASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD3Q9BV44 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 DRAXINP1-201ENST00000437611 948 ntBASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 TPSP2-201ENST00000561760 610 ntBASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 AC132872.4-202ENST00000622924 2756 ntBASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
THUMPD3Q9BV44 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.14■□□□□ 0.18
THUMPD3Q9BV44 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 AC233702.3-201ENST00000578656 1387 ntBASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 ALOX12P2-203ENST00000570921 1945 ntBASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 LINC00265-3P-201ENST00000447588 903 ntBASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.14■□□□□ 0.17
THUMPD3Q9BV44 TOB2P1-201ENST00000469761 992 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms