Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
PCGF1Q9BSM1 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 AL121761.2-201ENST00000598007 1648 ntBASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 AC008741.2-201ENST00000612792 3115 ntBASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 AC009947.1-201ENST00000444350 727 ntBASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 RPS15P9-201ENST00000494093 319 ntBASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 MIR4751-201ENST00000578027 74 ntBASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 AC023511.2-201ENST00000618803 211 ntBASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.19□□□□□ -0.14
PCGF1Q9BSM1 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 AL135999.2-201ENST00000622438 1686 ntBASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 AL591424.1-201ENST00000442569 1213 ntBASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 KRT18P3-201ENST00000451602 1288 ntBASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 RNA5SP416-201ENST00000516838 111 ntBASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 AC092865.5-201ENST00000545435 363 ntBASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 FAM197Y3-203ENST00000618346 717 ntBASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PCGF1Q9BSM1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms