Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 MIR574-201ENST00000385209 96 ntBASIC15.37■□□□□ 0.05
NPAS1Q99742 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 VN2R19P-201ENST00000442399 1052 ntBASIC15.37■□□□□ 0.05
NPAS1Q99742 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
NPAS1Q99742 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.37■□□□□ 0.05
NPAS1Q99742 AC140113.2-201ENST00000604370 208 ntBASIC15.37■□□□□ 0.05
NPAS1Q99742 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
NPAS1Q99742 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.37■□□□□ 0.05
NPAS1Q99742 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
NPAS1Q99742 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
NPAS1Q99742 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.37■□□□□ 0.05
NPAS1Q99742 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 AL645728.1-201ENST00000366221 2101 ntBASIC15.37■□□□□ 0.05
NPAS1Q99742 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPAS1Q99742 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.36■□□□□ 0.05
NPAS1Q99742 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.36■□□□□ 0.05
NPAS1Q99742 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 AC078925.2-201ENST00000624013 1973 ntBASIC15.36■□□□□ 0.05
NPAS1Q99742 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
NPAS1Q99742 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
NPAS1Q99742 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NPAS1Q99742 AC092171.3-201ENST00000610122 2651 ntBASIC15.36■□□□□ 0.05
NPAS1Q99742 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.36■□□□□ 0.05
NPAS1Q99742 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NPAS1Q99742 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.36■□□□□ 0.05
NPAS1Q99742 MIR940-201ENST00000401276 94 ntBASIC15.36■□□□□ 0.05
NPAS1Q99742 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.36■□□□□ 0.05
NPAS1Q99742 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.36■□□□□ 0.05
NPAS1Q99742 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.36■□□□□ 0.05
NPAS1Q99742 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.36■□□□□ 0.05
NPAS1Q99742 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.36■□□□□ 0.05
NPAS1Q99742 AC018845.2-201ENST00000568326 409 ntBASIC15.36■□□□□ 0.05
NPAS1Q99742 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.36■□□□□ 0.05
NPAS1Q99742 AC064836.3-201ENST00000607928 673 ntBASIC15.36■□□□□ 0.05
NPAS1Q99742 ACTL9-202ENST00000612068 1252 ntBASIC15.36■□□□□ 0.05
NPAS1Q99742 AC010654.1-201ENST00000615722 808 ntBASIC15.36■□□□□ 0.05
NPAS1Q99742 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.36■□□□□ 0.05
NPAS1Q99742 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
NPAS1Q99742 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
NPAS1Q99742 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.36■□□□□ 0.05
NPAS1Q99742 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NPAS1Q99742 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.36■□□□□ 0.05
NPAS1Q99742 AGGF1P2-201ENST00000426656 2106 ntBASIC15.35■□□□□ 0.05
NPAS1Q99742 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NPAS1Q99742 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NPAS1Q99742 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 CRYGEP-201ENST00000412192 528 ntBASIC15.35■□□□□ 0.05
NPAS1Q99742 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS1Q99742 PRSS29P-201ENST00000440800 595 ntBASIC15.35■□□□□ 0.05
NPAS1Q99742 POLD2P1-201ENST00000511220 997 ntBASIC15.35■□□□□ 0.05
NPAS1Q99742 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NPAS1Q99742 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.35■□□□□ 0.05
NPAS1Q99742 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 AL121761.2-201ENST00000598007 1648 ntBASIC15.35■□□□□ 0.05
NPAS1Q99742 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 ZNF259P1-201ENST00000407656 1365 ntBASIC15.35■□□□□ 0.05
NPAS1Q99742 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NPAS1Q99742 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS1Q99742 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS1Q99742 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS1Q99742 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS1Q99742 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS1Q99742 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS1Q99742 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.34■□□□□ 0.05
NPAS1Q99742 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NPAS1Q99742 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms