Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 IGHV3-22-201ENST00000520721 359 ntBASIC19.92■□□□□ 0.78
NEK1Q96PY6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 AC005412.3-201ENST00000580309 715 ntBASIC19.92■□□□□ 0.78
NEK1Q96PY6 GPALPP1-207ENST00000611650 899 ntBASIC19.92■□□□□ 0.78
NEK1Q96PY6 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.92■□□□□ 0.78
NEK1Q96PY6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEK1Q96PY6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.91■□□□□ 0.78
NEK1Q96PY6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 PRSS29P-201ENST00000440800 595 ntBASIC19.91■□□□□ 0.78
NEK1Q96PY6 AC009947.1-201ENST00000444350 727 ntBASIC19.91■□□□□ 0.78
NEK1Q96PY6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 RNA5SP415-201ENST00000517246 115 ntBASIC19.91■□□□□ 0.78
NEK1Q96PY6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 CYP2A7P1-201ENST00000595391 815 ntBASIC19.91■□□□□ 0.78
NEK1Q96PY6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 AC010654.1-201ENST00000615722 808 ntBASIC19.91■□□□□ 0.78
NEK1Q96PY6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.91■□□□□ 0.78
NEK1Q96PY6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEK1Q96PY6 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 AC079328.2-201ENST00000561241 3354 ntBASIC19.9■□□□□ 0.78
NEK1Q96PY6 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 FAM185BP-201ENST00000443595 716 ntBASIC19.9■□□□□ 0.78
NEK1Q96PY6 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
NEK1Q96PY6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEK1Q96PY6 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.78
NEK1Q96PY6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.89■□□□□ 0.77
NEK1Q96PY6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK1Q96PY6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms