Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ALG1L8P-201ENST00000533887 760 ntBASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.07■□□□□ 0.64
SYNGAP1Q96PV0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 AC002472.2-201ENST00000442739 958 ntBASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 TSPY16P-201ENST00000449843 468 ntBASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 TERF1P3-201ENST00000505638 1227 ntBASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 AP001350.2-201ENST00000625104 1094 ntBASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SYNGAP1Q96PV0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 AC236430.1-201ENST00000402231 743 ntBASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 FAM207CP-201ENST00000443486 507 ntBASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 RN7SL204P-201ENST00000582831 262 ntBASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 AC027307.2-201ENST00000591252 911 ntBASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 MIR6080-201ENST00000617359 66 ntBASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 OR6D1P-202ENST00000641007 5290 ntBASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SYNGAP1Q96PV0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 GK-202ENST00000378941 458 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 AC069120.2-201ENST00000524091 540 ntBASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 AL390754.1-201ENST00000619088 582 ntBASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 AF228730.6-201ENST00000641497 218 ntBASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 AC084121.3-201ENST00000641716 218 ntBASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 AC105233.6-201ENST00000642093 218 ntBASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.04■□□□□ 0.64
SYNGAP1Q96PV0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms