Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 DBET-201ENST00000630918 3363 ntBASIC12.8□□□□□ -0.36
AP1S3Q96PC3 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 STRCP1-201ENST00000509801 5328 ntBASIC12.8□□□□□ -0.36
AP1S3Q96PC3 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 AC009947.2-201ENST00000444014 672 ntBASIC12.8□□□□□ -0.36
AP1S3Q96PC3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 AC142381.4-202ENST00000563973 229 ntBASIC12.8□□□□□ -0.36
AP1S3Q96PC3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 KRT8P47-201ENST00000604727 1398 ntBASIC12.8□□□□□ -0.36
AP1S3Q96PC3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
AP1S3Q96PC3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 AC128688.1-201ENST00000487626 519 ntBASIC12.79□□□□□ -0.36
AP1S3Q96PC3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 FITM1-202ENST00000559294 800 ntBASIC12.79□□□□□ -0.36
AP1S3Q96PC3 NEK4P2-201ENST00000580004 1012 ntBASIC12.79□□□□□ -0.36
AP1S3Q96PC3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 LYSMD4-203ENST00000378904 2122 ntBASIC12.79□□□□□ -0.36
AP1S3Q96PC3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 LINC01311-201ENST00000565162 1445 ntBASIC12.79□□□□□ -0.36
AP1S3Q96PC3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
AP1S3Q96PC3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
AP1S3Q96PC3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms