Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC010654.1-201ENST00000615722 808 ntBASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 AC004790.2-201ENST00000623588 572 ntBASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 AC117500.6-201ENST00000624871 588 ntBASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDLIM5Q96HC4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 RNA5SP419-201ENST00000515908 135 ntBASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.42■□□□□ 0.22
PDLIM5Q96HC4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PDLIM5Q96HC4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 260.5 ms