Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 FAM220CP-201ENST00000395253 831 ntBASIC15.26■□□□□ 0.03
SNX33Q8WV41 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 IGHV3-47-201ENST00000425060 335 ntBASIC15.26■□□□□ 0.03
SNX33Q8WV41 DUSP5P1-201ENST00000441325 1139 ntBASIC15.26■□□□□ 0.03
SNX33Q8WV41 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 STK25P1-201ENST00000585406 838 ntBASIC15.26■□□□□ 0.03
SNX33Q8WV41 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.26■□□□□ 0.03
SNX33Q8WV41 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNX33Q8WV41 AC125634.1-201ENST00000438758 1403 ntBASIC15.26■□□□□ 0.03
SNX33Q8WV41 KRT8P10-201ENST00000450021 1447 ntBASIC15.26■□□□□ 0.03
SNX33Q8WV41 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 LINC02199-201ENST00000506655 2702 ntBASIC15.25■□□□□ 0.03
SNX33Q8WV41 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 AL662844.4-201ENST00000606367 2838 ntBASIC15.25■□□□□ 0.03
SNX33Q8WV41 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 AL845331.1-201ENST00000424978 1190 ntBASIC15.25■□□□□ 0.03
SNX33Q8WV41 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 AP005901.3-202ENST00000581653 237 ntBASIC15.25■□□□□ 0.03
SNX33Q8WV41 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 CICP6-201ENST00000457191 2729 ntBASIC15.25■□□□□ 0.03
SNX33Q8WV41 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 GPR89P-201ENST00000407924 1495 ntBASIC15.25■□□□□ 0.03
SNX33Q8WV41 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.25■□□□□ 0.03
SNX33Q8WV41 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNX33Q8WV41 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SNX33Q8WV41 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX33Q8WV41 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX33Q8WV41 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.24■□□□□ 0.03
SNX33Q8WV41 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.24■□□□□ 0.03
SNX33Q8WV41 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
SNX33Q8WV41 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SNX33Q8WV41 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.24■□□□□ 0.03
SNX33Q8WV41 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.24■□□□□ 0.03
SNX33Q8WV41 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms