Protein–RNA interactions for Protein: Q8TC12

RDH11, Retinol dehydrogenase 11, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11Q8TC12 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 PRYP5-201ENST00000451909 266 ntBASIC16.6■□□□□ 0.25
RDH11Q8TC12 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 AP002414.4-201ENST00000589764 1148 ntBASIC16.6■□□□□ 0.25
RDH11Q8TC12 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.6■□□□□ 0.25
RDH11Q8TC12 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RDH11Q8TC12 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 LINC00265-3P-201ENST00000447588 903 ntBASIC16.59■□□□□ 0.25
RDH11Q8TC12 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 AC074051.2-201ENST00000565115 352 ntBASIC16.59■□□□□ 0.25
RDH11Q8TC12 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RDH11Q8TC12 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RDH11Q8TC12 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RDH11Q8TC12 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.58■□□□□ 0.25
RDH11Q8TC12 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RDH11Q8TC12 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RDH11Q8TC12 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.58■□□□□ 0.25
RDH11Q8TC12 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RDH11Q8TC12 AC008741.2-201ENST00000612792 3115 ntBASIC16.58■□□□□ 0.24
RDH11Q8TC12 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RDH11Q8TC12 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.58■□□□□ 0.24
RDH11Q8TC12 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.58■□□□□ 0.24
RDH11Q8TC12 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.58■□□□□ 0.24
RDH11Q8TC12 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.58■□□□□ 0.24
RDH11Q8TC12 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 AC069148.1-201ENST00000608741 768 ntBASIC16.58■□□□□ 0.24
RDH11Q8TC12 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RDH11Q8TC12 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.58■□□□□ 0.24
RDH11Q8TC12 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms