Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 AK4P3-201ENST00000418260 669 ntBASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 KRT18P21-201ENST00000515767 1272 ntBASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 RN7SL850P-201ENST00000579959 291 ntBASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.71■□□□□ 0.27
RFWD2Q8NHY2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 AL603832.2-201ENST00000566195 2125 ntBASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 AL596087.1-201ENST00000400979 1969 ntBASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 SPDYE15P-201ENST00000424157 909 ntBASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 GPR32P1-201ENST00000601788 811 ntBASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.7■□□□□ 0.26
RFWD2Q8NHY2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 AC092647.4-201ENST00000457211 535 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms