Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CDRT4Q8N9R6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 SLC25A6P4-201ENST00000586535 553 ntBASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 AL049840.3-201ENST00000602669 611 ntBASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 AC010654.1-201ENST00000615722 808 ntBASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 AC004790.2-201ENST00000623588 572 ntBASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 AP001350.2-201ENST00000625104 1094 ntBASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
CDRT4Q8N9R6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.1
CDRT4Q8N9R6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDRT4Q8N9R6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 HCG4-201ENST00000418983 998 ntBASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 AC098831.1-202ENST00000438821 336 ntBASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 PRSS29P-201ENST00000440800 595 ntBASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 RNA5SP419-201ENST00000515908 135 ntBASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 AC116407.3-201ENST00000623905 1129 ntBASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDRT4Q8N9R6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDRT4Q8N9R6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDRT4Q8N9R6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDRT4Q8N9R6 AC092171.3-201ENST00000610122 2651 ntBASIC15.63■□□□□ 0.09
CDRT4Q8N9R6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDRT4Q8N9R6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms