Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
TTC9CQ8N5M4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 AL391256.1-201ENST00000443260 1855 ntBASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 ELK2BP-201ENST00000415014 1224 ntBASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 AC018712.1-201ENST00000455767 687 ntBASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 RPS15P9-201ENST00000494093 319 ntBASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 KRT126P-201ENST00000549467 1181 ntBASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 MIR1199-201ENST00000621445 119 ntBASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 AL645728.1-201ENST00000366221 2101 ntBASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
TTC9CQ8N5M4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 RNF216P1-203ENST00000404404 2427 ntBASIC13.33□□□□□ -0.27
TTC9CQ8N5M4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 FLJ38576-201ENST00000623820 2459 ntBASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
TTC9CQ8N5M4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms