Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF440Q8IYI8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 AC131009.4-201ENST00000624048 1740 ntBASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 HCG4-201ENST00000418983 998 ntBASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ZNF440Q8IYI8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 AC124067.4-201ENST00000519691 2379 ntBASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 MRPL20P1-201ENST00000400819 433 ntBASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 AC087641.1-201ENST00000557561 1021 ntBASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 AL773604.1-201ENST00000617417 272 ntBASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ZNF440Q8IYI8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.38■□□□□ 0.05
ZNF440Q8IYI8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms