Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 IGHV3-41-201ENST00000613121 348 ntBASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 AD001527.2-201ENST00000622994 785 ntBASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NUDCD3Q8IVD9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AL021920.2-201ENST00000624828 1351 ntBASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 LINC00895-201ENST00000629028 1637 ntBASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AL596275.1-201ENST00000423464 877 ntBASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AC009533.2-201ENST00000543664 586 ntBASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AC090616.6-201ENST00000582640 721 ntBASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AC073592.5-201ENST00000624854 528 ntBASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
NUDCD3Q8IVD9 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
NUDCD3Q8IVD9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 AC073508.3-201ENST00000619697 1419 ntBASIC16.77■□□□□ 0.27
NUDCD3Q8IVD9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms