Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 AC074051.2-201ENST00000565115 352 ntBASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 AC114341.1-201ENST00000618070 349 ntBASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
MRPL55Q7Z7F7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC10.9□□□□□ -0.67
MRPL55Q7Z7F7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
MRPL55Q7Z7F7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
MRPL55Q7Z7F7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
MRPL55Q7Z7F7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
MRPL55Q7Z7F7 PCDHA14-201ENST00000506751 2298 ntBASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 POM121L3P-201ENST00000419331 1163 ntBASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 AGGF1P2-201ENST00000426656 2106 ntBASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 AC069148.1-201ENST00000608741 768 ntBASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
MRPL55Q7Z7F7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 TUBB8P12-201ENST00000308911 1335 ntBASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 TUBB7P-202ENST00000428444 1305 ntBASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 TUBB8P7-204ENST00000567960 1332 ntBASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
MRPL55Q7Z7F7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms