Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ANKRD55Q3KP44 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
ANKRD55Q3KP44 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ANKRD55Q3KP44 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
ANKRD55Q3KP44 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
ANKRD55Q3KP44 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 AK4P3-201ENST00000418260 669 ntBASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 HLA-F-220ENST00000434407 884 ntBASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 STK25P1-201ENST00000585406 838 ntBASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 AL138966.2-201ENST00000621997 464 ntBASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ANKRD55Q3KP44 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 RNF152P1-201ENST00000397754 604 ntBASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 AC092647.4-201ENST00000457211 535 ntBASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 HLA-J-202ENST00000469281 1241 ntBASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 AP003733.1-201ENST00000491725 852 ntBASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 AC111152.3-201ENST00000569699 673 ntBASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ANKRD55Q3KP44 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.02□□□□□ -0.16
ANKRD55Q3KP44 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms