Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 AL080243.2-201ENST00000418783 582 ntBASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 MEP1AP4-201ENST00000423244 1087 ntBASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 KLF2P4-201ENST00000451959 1225 ntBASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 PFN1P12-201ENST00000455938 534 ntBASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
RSPO4Q2I0M5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 AC073389.1-201ENST00000595595 795 ntBASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 WFDC1-204ENST00000613603 549 ntBASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RSPO4Q2I0M5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 MIR1247-201ENST00000408206 136 ntBASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AC105021.1-202ENST00000570572 669 ntBASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 SRD5A3P1-201ENST00000603021 949 ntBASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RSPO4Q2I0M5 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms