Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YBX1P67809 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YBX1P67809 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YBX1P67809 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
YBX1P67809 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YBX1P67809 AL022342.1-201ENST00000400363 863 ntBASIC16.43■□□□□ 0.22
YBX1P67809 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.43■□□□□ 0.22
YBX1P67809 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YBX1P67809 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.43■□□□□ 0.22
YBX1P67809 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 AC145285.3-201ENST00000564603 959 ntBASIC16.43■□□□□ 0.22
YBX1P67809 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
YBX1P67809 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.43■□□□□ 0.22
YBX1P67809 AL671883.3-201ENST00000603274 991 ntBASIC16.43■□□□□ 0.22
YBX1P67809 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
YBX1P67809 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YBX1P67809 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
YBX1P67809 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
YBX1P67809 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.43■□□□□ 0.22
YBX1P67809 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.43■□□□□ 0.22
YBX1P67809 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.43■□□□□ 0.22
YBX1P67809 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
YBX1P67809 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
YBX1P67809 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 AC002310.6-201ENST00000624451 1377 ntBASIC16.42■□□□□ 0.22
YBX1P67809 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.42■□□□□ 0.22
YBX1P67809 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.42■□□□□ 0.22
YBX1P67809 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.42■□□□□ 0.22
YBX1P67809 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
YBX1P67809 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.42■□□□□ 0.22
YBX1P67809 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.42■□□□□ 0.22
YBX1P67809 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.42■□□□□ 0.22
YBX1P67809 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.42■□□□□ 0.22
YBX1P67809 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 PGM5P2-202ENST00000637225 1043 ntBASIC16.42■□□□□ 0.22
YBX1P67809 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
YBX1P67809 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 BCL2-203ENST00000589955 5011 ntBASIC16.42■□□□□ 0.22
YBX1P67809 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.42■□□□□ 0.22
YBX1P67809 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
YBX1P67809 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
YBX1P67809 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.41■□□□□ 0.22
YBX1P67809 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
YBX1P67809 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
YBX1P67809 AC007967.2-201ENST00000432613 625 ntBASIC16.41■□□□□ 0.22
YBX1P67809 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
YBX1P67809 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.41■□□□□ 0.22
YBX1P67809 AC106730.1-201ENST00000566722 1090 ntBASIC16.41■□□□□ 0.22
YBX1P67809 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.41■□□□□ 0.22
YBX1P67809 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.41■□□□□ 0.22
YBX1P67809 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.41■□□□□ 0.22
YBX1P67809 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.41■□□□□ 0.22
YBX1P67809 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
YBX1P67809 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
YBX1P67809 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms