Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.52□□□□□ -0.08
AP3S2P59780 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
AP3S2P59780 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 AC002310.6-201ENST00000624451 1377 ntBASIC14.52□□□□□ -0.08
AP3S2P59780 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
AP3S2P59780 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 ESRRAP1-201ENST00000400596 1257 ntBASIC14.52□□□□□ -0.09
AP3S2P59780 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
AP3S2P59780 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
AP3S2P59780 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.52□□□□□ -0.09
AP3S2P59780 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.52□□□□□ -0.09
AP3S2P59780 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC14.52□□□□□ -0.09
AP3S2P59780 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.52□□□□□ -0.09
AP3S2P59780 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.52□□□□□ -0.09
AP3S2P59780 TK1-205ENST00000590862 642 ntTSL 3 BASIC14.52□□□□□ -0.09
AP3S2P59780 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.52□□□□□ -0.09
AP3S2P59780 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
AP3S2P59780 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
AP3S2P59780 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.52□□□□□ -0.09
AP3S2P59780 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.52□□□□□ -0.09
AP3S2P59780 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
AP3S2P59780 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
AP3S2P59780 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
AP3S2P59780 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S2P59780 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S2P59780 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S2P59780 AC097374.2-201ENST00000618617 1306 ntBASIC14.51□□□□□ -0.09
AP3S2P59780 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S2P59780 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.51□□□□□ -0.09
AP3S2P59780 AC010653.2-201ENST00000623505 997 ntBASIC14.51□□□□□ -0.09
AP3S2P59780 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.51□□□□□ -0.09
AP3S2P59780 AC073648.6-201ENST00000641589 218 ntBASIC14.51□□□□□ -0.09
AP3S2P59780 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S2P59780 FAM45BP-202ENST00000592932 1624 ntBASIC14.51□□□□□ -0.09
AP3S2P59780 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
AP3S2P59780 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
AP3S2P59780 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.51□□□□□ -0.09
AP3S2P59780 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.5□□□□□ -0.09
AP3S2P59780 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
AP3S2P59780 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
AP3S2P59780 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.5□□□□□ -0.09
AP3S2P59780 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
AP3S2P59780 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
AP3S2P59780 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 AC109462.3-201ENST00000573934 613 ntBASIC14.5□□□□□ -0.09
AP3S2P59780 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.5□□□□□ -0.09
AP3S2P59780 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
AP3S2P59780 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.5□□□□□ -0.09
AP3S2P59780 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms