Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
APOC4P55056 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.33□□□□□ -0.44
APOC4P55056 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.33□□□□□ -0.44
APOC4P55056 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 AC092919.2-201ENST00000623631 1645 ntBASIC12.33□□□□□ -0.44
APOC4P55056 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
APOC4P55056 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
APOC4P55056 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC4P55056 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
APOC4P55056 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC4P55056 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC4P55056 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
APOC4P55056 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 HMGA1P7-201ENST00000406908 502 ntBASIC12.32□□□□□ -0.44
APOC4P55056 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 AL355306.1-201ENST00000415580 579 ntBASIC12.32□□□□□ -0.44
APOC4P55056 TIMM8BP1-201ENST00000452384 211 ntBASIC12.32□□□□□ -0.44
APOC4P55056 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC4P55056 AC109635.5-201ENST00000533593 962 ntBASIC12.32□□□□□ -0.44
APOC4P55056 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC4P55056 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.32□□□□□ -0.44
APOC4P55056 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC4P55056 AL009183.1-201ENST00000603760 355 ntBASIC12.32□□□□□ -0.44
APOC4P55056 AL031055.1-201ENST00000606362 631 ntBASIC12.32□□□□□ -0.44
APOC4P55056 AC026120.1-201ENST00000611536 926 ntBASIC12.32□□□□□ -0.44
APOC4P55056 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOC4P55056 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
APOC4P55056 AKAP8P1-201ENST00000434743 1349 ntBASIC12.32□□□□□ -0.44
APOC4P55056 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
APOC4P55056 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC4P55056 AC067852.2-201ENST00000590513 2313 ntBASIC12.32□□□□□ -0.44
APOC4P55056 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC4P55056 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
APOC4P55056 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC4P55056 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
APOC4P55056 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
APOC4P55056 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC4P55056 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
APOC4P55056 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
APOC4P55056 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC4P55056 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC12.31□□□□□ -0.44
APOC4P55056 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
APOC4P55056 AL121761.2-201ENST00000598007 1648 ntBASIC12.31□□□□□ -0.44
APOC4P55056 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.31□□□□□ -0.44
APOC4P55056 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC4P55056 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.31□□□□□ -0.44
APOC4P55056 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.31□□□□□ -0.44
APOC4P55056 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC4P55056 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms