Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.85■□□□□ 0.45
BRCC3P46736 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
BRCC3P46736 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
BRCC3P46736 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
BRCC3P46736 AL645608.8-201ENST00000606034 2086 ntBASIC17.84■□□□□ 0.45
BRCC3P46736 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
BRCC3P46736 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.84■□□□□ 0.45
BRCC3P46736 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
BRCC3P46736 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
BRCC3P46736 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.84■□□□□ 0.45
BRCC3P46736 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 FAM86GP-201ENST00000448322 971 ntBASIC17.84■□□□□ 0.45
BRCC3P46736 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 AP000842.3-202ENST00000569238 1080 ntBASIC17.84■□□□□ 0.45
BRCC3P46736 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.84■□□□□ 0.45
BRCC3P46736 AC021097.1-201ENST00000607902 574 ntBASIC17.84■□□□□ 0.45
BRCC3P46736 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
BRCC3P46736 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.84■□□□□ 0.45
BRCC3P46736 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.84■□□□□ 0.45
BRCC3P46736 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
BRCC3P46736 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.84■□□□□ 0.45
BRCC3P46736 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRCC3P46736 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRCC3P46736 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.83■□□□□ 0.45
BRCC3P46736 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRCC3P46736 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRCC3P46736 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
BRCC3P46736 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
BRCC3P46736 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
BRCC3P46736 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
BRCC3P46736 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 OR6D1P-202ENST00000641007 5290 ntBASIC17.83■□□□□ 0.44
BRCC3P46736 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
BRCC3P46736 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BRCC3P46736 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
BRCC3P46736 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.83■□□□□ 0.44
BRCC3P46736 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.83■□□□□ 0.44
BRCC3P46736 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.83■□□□□ 0.44
BRCC3P46736 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.83■□□□□ 0.44
BRCC3P46736 SPDYE14P-201ENST00000442619 822 ntBASIC17.83■□□□□ 0.44
BRCC3P46736 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.83■□□□□ 0.44
BRCC3P46736 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.83■□□□□ 0.44
BRCC3P46736 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.83■□□□□ 0.44
BRCC3P46736 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.83■□□□□ 0.44
BRCC3P46736 DUX4L27-201ENST00000554796 1261 ntBASIC17.83■□□□□ 0.44
BRCC3P46736 AC026150.2-201ENST00000564693 1156 ntBASIC17.83■□□□□ 0.44
BRCC3P46736 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.83■□□□□ 0.44
BRCC3P46736 AP001059.3-201ENST00000619053 235 ntBASIC17.83■□□□□ 0.44
BRCC3P46736 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.83■□□□□ 0.44
BRCC3P46736 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.83■□□□□ 0.44
BRCC3P46736 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
BRCC3P46736 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
BRCC3P46736 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
BRCC3P46736 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.82■□□□□ 0.44
BRCC3P46736 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 SNX33P1-201ENST00000592116 1762 ntBASIC17.82■□□□□ 0.44
BRCC3P46736 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.82■□□□□ 0.44
BRCC3P46736 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
BRCC3P46736 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms