Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.17□□□□□ -0.14
CXCL3P19876 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CXCL3P19876 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CXCL3P19876 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CXCL3P19876 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CXCL3P19876 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
CXCL3P19876 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CXCL3P19876 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CXCL3P19876 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CXCL3P19876 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 AL353807.1-201ENST00000427475 662 ntBASIC14.16□□□□□ -0.14
CXCL3P19876 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.16□□□□□ -0.14
CXCL3P19876 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.16□□□□□ -0.14
CXCL3P19876 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL3P19876 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.16□□□□□ -0.14
CXCL3P19876 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL3P19876 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.16□□□□□ -0.14
CXCL3P19876 AC136621.1-201ENST00000624017 2304 ntBASIC14.16□□□□□ -0.14
CXCL3P19876 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CXCL3P19876 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL3P19876 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.16□□□□□ -0.14
CXCL3P19876 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.16□□□□□ -0.14
CXCL3P19876 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CXCL3P19876 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CXCL3P19876 TUBB8P12-201ENST00000308911 1335 ntBASIC14.15□□□□□ -0.14
CXCL3P19876 TUBB7P-202ENST00000428444 1305 ntBASIC14.15□□□□□ -0.14
CXCL3P19876 TUBB8P7-204ENST00000567960 1332 ntBASIC14.15□□□□□ -0.14
CXCL3P19876 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCL3P19876 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCL3P19876 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCL3P19876 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 AC128676.1-201ENST00000454392 318 ntBASIC14.15□□□□□ -0.14
CXCL3P19876 C1QBPP2-201ENST00000528754 825 ntBASIC14.15□□□□□ -0.14
CXCL3P19876 SLC25A1P4-201ENST00000567977 778 ntBASIC14.15□□□□□ -0.14
CXCL3P19876 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCL3P19876 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.15□□□□□ -0.14
CXCL3P19876 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.15□□□□□ -0.14
CXCL3P19876 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CXCL3P19876 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CXCL3P19876 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 AC007292.2-201ENST00000593524 1812 ntBASIC14.15□□□□□ -0.14
CXCL3P19876 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCL3P19876 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.15
CXCL3P19876 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CXCL3P19876 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CXCL3P19876 CICP14-201ENST00000629111 2732 ntBASIC14.14□□□□□ -0.15
CXCL3P19876 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCL3P19876 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCL3P19876 LINC02447-202ENST00000501888 2146 ntBASIC14.14□□□□□ -0.15
CXCL3P19876 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCL3P19876 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms