Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDGFRAP16234 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PDGFRAP16234 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.68■□□□□ 0.42
PDGFRAP16234 PMS2P1-201ENST00000431037 1228 ntBASIC17.68■□□□□ 0.42
PDGFRAP16234 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PDGFRAP16234 POLD2P1-201ENST00000511220 997 ntBASIC17.68■□□□□ 0.42
PDGFRAP16234 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.68■□□□□ 0.42
PDGFRAP16234 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.68■□□□□ 0.42
PDGFRAP16234 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.68■□□□□ 0.42
PDGFRAP16234 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.68■□□□□ 0.42
PDGFRAP16234 MPDU1-223ENST00000582151 728 ntBASIC17.68■□□□□ 0.42
PDGFRAP16234 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFRAP16234 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PDGFRAP16234 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFRAP16234 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.68■□□□□ 0.42
PDGFRAP16234 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFRAP16234 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.68■□□□□ 0.42
PDGFRAP16234 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFRAP16234 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.68■□□□□ 0.42
PDGFRAP16234 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PDGFRAP16234 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.67■□□□□ 0.42
PDGFRAP16234 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 KRT18P58-201ENST00000527480 1120 ntBASIC17.67■□□□□ 0.42
PDGFRAP16234 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.67■□□□□ 0.42
PDGFRAP16234 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.67■□□□□ 0.42
PDGFRAP16234 OR7E47P-204ENST00000575924 449 ntBASIC17.67■□□□□ 0.42
PDGFRAP16234 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.67■□□□□ 0.42
PDGFRAP16234 AC013467.2-201ENST00000605472 835 ntBASIC17.67■□□□□ 0.42
PDGFRAP16234 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PDGFRAP16234 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.67■□□□□ 0.42
PDGFRAP16234 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PDGFRAP16234 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.67■□□□□ 0.42
PDGFRAP16234 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.67■□□□□ 0.42
PDGFRAP16234 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.67■□□□□ 0.42
PDGFRAP16234 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PDGFRAP16234 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PDGFRAP16234 UBALD1-205ENST00000590891 2641 ntBASIC17.67■□□□□ 0.42
PDGFRAP16234 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
PDGFRAP16234 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PDGFRAP16234 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDGFRAP16234 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDGFRAP16234 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PDGFRAP16234 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDGFRAP16234 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.66■□□□□ 0.42
PDGFRAP16234 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PDGFRAP16234 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.66■□□□□ 0.42
PDGFRAP16234 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PDGFRAP16234 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.66■□□□□ 0.42
PDGFRAP16234 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PDGFRAP16234 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PDGFRAP16234 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms