Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
CSF1P09603 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 AC104640.1-201ENST00000562617 2109 ntBASIC14.64□□□□□ -0.07
CSF1P09603 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 AC092329.2-201ENST00000598402 547 ntBASIC14.64□□□□□ -0.07
CSF1P09603 AC024563.2-201ENST00000603282 481 ntBASIC14.64□□□□□ -0.07
CSF1P09603 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.64□□□□□ -0.07
CSF1P09603 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CSF1P09603 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CSF1P09603 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.63□□□□□ -0.07
CSF1P09603 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.63□□□□□ -0.07
CSF1P09603 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.63□□□□□ -0.07
CSF1P09603 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CSF1P09603 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CSF1P09603 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CSF1P09603 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
CSF1P09603 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.63□□□□□ -0.07
CSF1P09603 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.63□□□□□ -0.07
CSF1P09603 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CSF1P09603 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CSF1P09603 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.63□□□□□ -0.07
CSF1P09603 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CSF1P09603 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.62□□□□□ -0.07
CSF1P09603 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CSF1P09603 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.62□□□□□ -0.07
CSF1P09603 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CSF1P09603 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CSF1P09603 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CSF1P09603 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.62□□□□□ -0.07
CSF1P09603 TSPY12P-201ENST00000421279 868 ntBASIC14.62□□□□□ -0.07
CSF1P09603 AL391256.1-201ENST00000443260 1855 ntBASIC14.62□□□□□ -0.07
CSF1P09603 BX276092.5-203ENST00000456199 560 ntBASIC14.62□□□□□ -0.07
CSF1P09603 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CSF1P09603 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.62□□□□□ -0.07
CSF1P09603 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.62□□□□□ -0.07
CSF1P09603 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms