Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL353801.3-201ENST00000609898 542 ntBASIC14.04□□□□□ -0.16
CTSDP07339 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CTSDP07339 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CTSDP07339 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CTSDP07339 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.04□□□□□ -0.16
CTSDP07339 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CTSDP07339 AC132938.5-201ENST00000624980 1813 ntBASIC14.04□□□□□ -0.16
CTSDP07339 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 AL603832.2-201ENST00000566195 2125 ntBASIC14.03□□□□□ -0.16
CTSDP07339 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.03□□□□□ -0.16
CTSDP07339 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.03□□□□□ -0.16
CTSDP07339 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.03□□□□□ -0.16
CTSDP07339 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.03□□□□□ -0.16
CTSDP07339 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.03□□□□□ -0.16
CTSDP07339 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.03□□□□□ -0.16
CTSDP07339 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 AC011558.1-201ENST00000623459 338 ntBASIC14.03□□□□□ -0.16
CTSDP07339 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 UBC-206ENST00000538617 1303 ntTSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 AC002310.6-201ENST00000624451 1377 ntBASIC14.03□□□□□ -0.16
CTSDP07339 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 AC063926.3-201ENST00000624734 5658 ntBASIC14.03□□□□□ -0.16
CTSDP07339 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CTSDP07339 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.03□□□□□ -0.16
CTSDP07339 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CTSDP07339 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CTSDP07339 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTSDP07339 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.02□□□□□ -0.16
CTSDP07339 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSDP07339 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSDP07339 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSDP07339 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSDP07339 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.02□□□□□ -0.16
CTSDP07339 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSDP07339 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CTSDP07339 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.16
CTSDP07339 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CTSDP07339 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CTSDP07339 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.02□□□□□ -0.16
CTSDP07339 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.02□□□□□ -0.17
CTSDP07339 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CTSDP07339 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CTSDP07339 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.02□□□□□ -0.17
CTSDP07339 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CTSDP07339 AC113347.1-201ENST00000413321 391 ntBASIC14.02□□□□□ -0.17
CTSDP07339 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms