Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.23■□□□□ 0.35
MT-ND3P03897 AL121912.1-201ENST00000603683 238 ntBASIC17.23■□□□□ 0.35
MT-ND3P03897 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND3P03897 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
MT-ND3P03897 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
MT-ND3P03897 GPR89P-201ENST00000407924 1495 ntBASIC17.23■□□□□ 0.35
MT-ND3P03897 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.23■□□□□ 0.35
MT-ND3P03897 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.23■□□□□ 0.35
MT-ND3P03897 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
MT-ND3P03897 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-ND3P03897 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-ND3P03897 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-ND3P03897 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-ND3P03897 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
MT-ND3P03897 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
MT-ND3P03897 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-ND3P03897 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MT-ND3P03897 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-ND3P03897 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
MT-ND3P03897 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.22■□□□□ 0.35
MT-ND3P03897 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.22■□□□□ 0.35
MT-ND3P03897 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
MT-ND3P03897 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-ND3P03897 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
MT-ND3P03897 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.22■□□□□ 0.35
MT-ND3P03897 AL135999.2-201ENST00000622438 1686 ntBASIC17.22■□□□□ 0.35
MT-ND3P03897 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.22■□□□□ 0.35
MT-ND3P03897 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
MT-ND3P03897 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-ND3P03897 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
MT-ND3P03897 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MT-ND3P03897 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-ND3P03897 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-ND3P03897 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.21■□□□□ 0.35
MT-ND3P03897 AC104692.2-201ENST00000603054 253 ntBASIC17.21■□□□□ 0.35
MT-ND3P03897 AC064862.7-201ENST00000604520 867 ntBASIC17.21■□□□□ 0.35
MT-ND3P03897 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.21■□□□□ 0.35
MT-ND3P03897 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MT-ND3P03897 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.21■□□□□ 0.35
MT-ND3P03897 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
MT-ND3P03897 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
MT-ND3P03897 AC125634.1-201ENST00000438758 1403 ntBASIC17.21■□□□□ 0.34
MT-ND3P03897 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MT-ND3P03897 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.2■□□□□ 0.34
MT-ND3P03897 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
MT-ND3P03897 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MT-ND3P03897 NUS1P2-201ENST00000417358 873 ntBASIC17.2■□□□□ 0.34
MT-ND3P03897 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.2■□□□□ 0.34
MT-ND3P03897 SAPCD2P3-201ENST00000455031 850 ntBASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms