Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VAPBO95292 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VAPBO95292 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.96■□□□□ 0.3
VAPBO95292 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VAPBO95292 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VAPBO95292 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.96■□□□□ 0.3
VAPBO95292 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VAPBO95292 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.96■□□□□ 0.3
VAPBO95292 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.96■□□□□ 0.3
VAPBO95292 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
VAPBO95292 PI4KAP1-204ENST00000612579 1703 ntBASIC16.96■□□□□ 0.3
VAPBO95292 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
VAPBO95292 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.96■□□□□ 0.3
VAPBO95292 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
VAPBO95292 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.95■□□□□ 0.3
VAPBO95292 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VAPBO95292 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VAPBO95292 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.95■□□□□ 0.3
VAPBO95292 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPBO95292 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
VAPBO95292 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.95■□□□□ 0.3
VAPBO95292 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.95■□□□□ 0.3
VAPBO95292 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.95■□□□□ 0.3
VAPBO95292 AC107918.4-202ENST00000641623 219 ntBASIC16.95■□□□□ 0.3
VAPBO95292 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
VAPBO95292 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
VAPBO95292 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPBO95292 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.95■□□□□ 0.3
VAPBO95292 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.95■□□□□ 0.3
VAPBO95292 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.95■□□□□ 0.3
VAPBO95292 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
VAPBO95292 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VAPBO95292 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VAPBO95292 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPBO95292 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.94■□□□□ 0.3
VAPBO95292 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VAPBO95292 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
VAPBO95292 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.94■□□□□ 0.3
VAPBO95292 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.94■□□□□ 0.3
VAPBO95292 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPBO95292 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 ELK2BP-201ENST00000415014 1224 ntBASIC16.94■□□□□ 0.3
VAPBO95292 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 LAGE3P1-201ENST00000425356 484 ntBASIC16.94■□□□□ 0.3
VAPBO95292 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPBO95292 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
VAPBO95292 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VAPBO95292 AC006557.2-201ENST00000592985 1240 ntBASIC16.94■□□□□ 0.3
VAPBO95292 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPBO95292 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
VAPBO95292 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPBO95292 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VAPBO95292 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.94■□□□□ 0.3
VAPBO95292 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
VAPBO95292 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VAPBO95292 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VAPBO95292 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms