Protein–RNA interactions for Protein: O94876

TMCC1, Transmembrane and coiled-coil domains protein 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1O94876 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.35■□□□□ 0.37
TMCC1O94876 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.35■□□□□ 0.37
TMCC1O94876 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.35■□□□□ 0.37
TMCC1O94876 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC1O94876 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC1O94876 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.35■□□□□ 0.37
TMCC1O94876 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC1O94876 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.35■□□□□ 0.37
TMCC1O94876 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC1O94876 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC1O94876 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TMCC1O94876 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMCC1O94876 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.34■□□□□ 0.37
TMCC1O94876 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 MIR940-201ENST00000401276 94 ntBASIC17.34■□□□□ 0.37
TMCC1O94876 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.34■□□□□ 0.37
TMCC1O94876 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.34■□□□□ 0.37
TMCC1O94876 AC092053.1-201ENST00000605787 1936 ntBASIC17.34■□□□□ 0.37
TMCC1O94876 AC064836.3-201ENST00000607928 673 ntBASIC17.34■□□□□ 0.37
TMCC1O94876 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 AC002310.6-201ENST00000624451 1377 ntBASIC17.34■□□□□ 0.37
TMCC1O94876 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.34■□□□□ 0.37
TMCC1O94876 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.34■□□□□ 0.37
TMCC1O94876 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMCC1O94876 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TMCC1O94876 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMCC1O94876 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TMCC1O94876 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMCC1O94876 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.37
TMCC1O94876 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMCC1O94876 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
TMCC1O94876 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMCC1O94876 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMCC1O94876 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMCC1O94876 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMCC1O94876 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMCC1O94876 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMCC1O94876 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMCC1O94876 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMCC1O94876 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.33■□□□□ 0.36
TMCC1O94876 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMCC1O94876 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.33■□□□□ 0.36
TMCC1O94876 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TMCC1O94876 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TMCC1O94876 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TMCC1O94876 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.33■□□□□ 0.36
TMCC1O94876 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.33■□□□□ 0.36
TMCC1O94876 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.33■□□□□ 0.36
TMCC1O94876 AL591424.1-201ENST00000442569 1213 ntBASIC17.33■□□□□ 0.36
TMCC1O94876 HCG4B-203ENST00000450128 991 ntBASIC17.33■□□□□ 0.36
TMCC1O94876 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.33■□□□□ 0.36
TMCC1O94876 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.33■□□□□ 0.36
TMCC1O94876 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.33■□□□□ 0.36
TMCC1O94876 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.33■□□□□ 0.36
TMCC1O94876 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.33■□□□□ 0.36
TMCC1O94876 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.33■□□□□ 0.36
TMCC1O94876 FAM197Y3-203ENST00000618346 717 ntBASIC17.33■□□□□ 0.36
TMCC1O94876 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMCC1O94876 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.33■□□□□ 0.36
TMCC1O94876 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMCC1O94876 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.33■□□□□ 0.36
TMCC1O94876 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMCC1O94876 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
TMCC1O94876 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMCC1O94876 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.33■□□□□ 0.36
TMCC1O94876 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMCC1O94876 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.32■□□□□ 0.36
TMCC1O94876 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TMCC1O94876 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TMCC1O94876 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.32■□□□□ 0.36
TMCC1O94876 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.32■□□□□ 0.36
TMCC1O94876 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMCC1O94876 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms