Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LRP4O75096 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LRP4O75096 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.07■□□□□ 0.16
LRP4O75096 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LRP4O75096 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.06■□□□□ 0.16
LRP4O75096 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
LRP4O75096 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.06■□□□□ 0.16
LRP4O75096 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.06■□□□□ 0.16
LRP4O75096 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.06■□□□□ 0.16
LRP4O75096 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.06■□□□□ 0.16
LRP4O75096 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.06■□□□□ 0.16
LRP4O75096 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 AC105020.1-201ENST00000435356 2205 ntBASIC16.06■□□□□ 0.16
LRP4O75096 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.06■□□□□ 0.16
LRP4O75096 AC027369.6-201ENST00000525520 931 ntBASIC16.06■□□□□ 0.16
LRP4O75096 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.06■□□□□ 0.16
LRP4O75096 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.06■□□□□ 0.16
LRP4O75096 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 AL391256.1-201ENST00000443260 1855 ntBASIC16.06■□□□□ 0.16
LRP4O75096 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.06■□□□□ 0.16
LRP4O75096 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.06■□□□□ 0.16
LRP4O75096 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.06■□□□□ 0.16
LRP4O75096 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.06■□□□□ 0.16
LRP4O75096 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.06■□□□□ 0.16
LRP4O75096 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.06■□□□□ 0.16
LRP4O75096 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.06■□□□□ 0.16
LRP4O75096 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.06■□□□□ 0.16
LRP4O75096 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LRP4O75096 LINC02560-201ENST00000596379 459 ntBASIC16.06■□□□□ 0.16
LRP4O75096 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.06■□□□□ 0.16
LRP4O75096 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.05■□□□□ 0.16
LRP4O75096 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LRP4O75096 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.05■□□□□ 0.16
LRP4O75096 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LRP4O75096 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
LRP4O75096 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
LRP4O75096 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.05■□□□□ 0.16
LRP4O75096 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.05■□□□□ 0.16
LRP4O75096 AL512361.1-201ENST00000554200 418 ntBASIC16.05■□□□□ 0.16
LRP4O75096 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.05■□□□□ 0.16
LRP4O75096 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.05■□□□□ 0.16
LRP4O75096 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LRP4O75096 CETN4P-206ENST00000642099 2168 ntBASIC16.05■□□□□ 0.16
LRP4O75096 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
LRP4O75096 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRP4O75096 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRP4O75096 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.04■□□□□ 0.16
LRP4O75096 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
LRP4O75096 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.04■□□□□ 0.16
LRP4O75096 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.04■□□□□ 0.16
LRP4O75096 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
LRP4O75096 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRP4O75096 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LRP4O75096 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.04■□□□□ 0.16
LRP4O75096 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.04■□□□□ 0.16
LRP4O75096 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRP4O75096 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRP4O75096 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.04■□□□□ 0.16
LRP4O75096 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.04■□□□□ 0.16
LRP4O75096 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.04■□□□□ 0.16
LRP4O75096 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.04■□□□□ 0.16
LRP4O75096 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.04■□□□□ 0.16
LRP4O75096 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRP4O75096 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.04■□□□□ 0.16
LRP4O75096 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.04■□□□□ 0.16
LRP4O75096 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.04■□□□□ 0.16
LRP4O75096 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LRP4O75096 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms