Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC003101.2-201ENST00000612557 442 ntBASIC19.57■□□□□ 0.72
CTNND1O60716 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.57■□□□□ 0.72
CTNND1O60716 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CTNND1O60716 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.57■□□□□ 0.72
CTNND1O60716 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.57■□□□□ 0.72
CTNND1O60716 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CTNND1O60716 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.56■□□□□ 0.72
CTNND1O60716 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTNND1O60716 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CTNND1O60716 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CTNND1O60716 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.56■□□□□ 0.72
CTNND1O60716 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.56■□□□□ 0.72
CTNND1O60716 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.56■□□□□ 0.72
CTNND1O60716 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.56■□□□□ 0.72
CTNND1O60716 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.56■□□□□ 0.72
CTNND1O60716 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CTNND1O60716 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CTNND1O60716 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CTNND1O60716 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.56■□□□□ 0.72
CTNND1O60716 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.56■□□□□ 0.72
CTNND1O60716 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CTNND1O60716 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CTNND1O60716 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.56■□□□□ 0.72
CTNND1O60716 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.55■□□□□ 0.72
CTNND1O60716 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.55■□□□□ 0.72
CTNND1O60716 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CTNND1O60716 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CTNND1O60716 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.55■□□□□ 0.72
CTNND1O60716 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.55■□□□□ 0.72
CTNND1O60716 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 CRB3P1-201ENST00000449338 276 ntBASIC19.55■□□□□ 0.72
CTNND1O60716 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.55■□□□□ 0.72
CTNND1O60716 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.55■□□□□ 0.72
CTNND1O60716 SERBP1P5-201ENST00000510079 1181 ntBASIC19.55■□□□□ 0.72
CTNND1O60716 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.55■□□□□ 0.72
CTNND1O60716 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.55■□□□□ 0.72
CTNND1O60716 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.55■□□□□ 0.72
CTNND1O60716 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.55■□□□□ 0.72
CTNND1O60716 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CTNND1O60716 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.55■□□□□ 0.72
CTNND1O60716 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
CTNND1O60716 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CTNND1O60716 FOXO1B-201ENST00000504678 1527 ntBASIC19.55■□□□□ 0.72
CTNND1O60716 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CTNND1O60716 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CTNND1O60716 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTNND1O60716 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CTNND1O60716 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNND1O60716 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CTNND1O60716 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.54■□□□□ 0.72
CTNND1O60716 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CTNND1O60716 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.54■□□□□ 0.72
CTNND1O60716 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms