Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GMDSO60547 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.99□□□□□ -0.01
GMDSO60547 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GMDSO60547 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
GMDSO60547 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GMDSO60547 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
GMDSO60547 AL513523.2-202ENST00000427283 2040 ntBASIC14.99□□□□□ -0.01
GMDSO60547 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
GMDSO60547 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
GMDSO60547 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
GMDSO60547 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.98□□□□□ -0.01
GMDSO60547 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.98□□□□□ -0.01
GMDSO60547 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 AC093525.9-201ENST00000624961 1746 ntBASIC14.98□□□□□ -0.01
GMDSO60547 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 AC105917.1-201ENST00000506637 2539 ntBASIC14.98□□□□□ -0.01
GMDSO60547 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
GMDSO60547 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.98□□□□□ -0.01
GMDSO60547 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 NUS1P1-201ENST00000446295 882 ntBASIC14.98□□□□□ -0.01
GMDSO60547 KRT16P4-201ENST00000453883 522 ntBASIC14.98□□□□□ -0.01
GMDSO60547 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.98□□□□□ -0.01
GMDSO60547 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.98□□□□□ -0.01
GMDSO60547 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 KRT8P10-201ENST00000450021 1447 ntBASIC14.98□□□□□ -0.01
GMDSO60547 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
GMDSO60547 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GMDSO60547 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GMDSO60547 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GMDSO60547 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.97□□□□□ -0.01
GMDSO60547 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.97□□□□□ -0.01
GMDSO60547 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.97□□□□□ -0.01
GMDSO60547 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.97□□□□□ -0.01
GMDSO60547 RCN1P2-201ENST00000398357 915 ntBASIC14.97□□□□□ -0.01
GMDSO60547 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14.97□□□□□ -0.01
GMDSO60547 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.97□□□□□ -0.01
GMDSO60547 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.97□□□□□ -0.01
GMDSO60547 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.97□□□□□ -0.01
GMDSO60547 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.97□□□□□ -0.01
GMDSO60547 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.97□□□□□ -0.01
GMDSO60547 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.97□□□□□ -0.01
GMDSO60547 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
GMDSO60547 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GMDSO60547 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GMDSO60547 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
GMDSO60547 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GMDSO60547 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms