Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
TRAF3IP2O43734 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.03■□□□□ -0
TRAF3IP2O43734 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 SLC22A20-204ENST00000530038 1673 ntBASIC15.03■□□□□ -0
TRAF3IP2O43734 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAF3IP2O43734 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRAF3IP2O43734 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.02■□□□□ -0
TRAF3IP2O43734 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TRAF3IP2O43734 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
TRAF3IP2O43734 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRAF3IP2O43734 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.02■□□□□ -0
TRAF3IP2O43734 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.02■□□□□ -0
TRAF3IP2O43734 AC026396.1-201ENST00000419388 421 ntBASIC15.02■□□□□ -0
TRAF3IP2O43734 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.02■□□□□ -0
TRAF3IP2O43734 PMS2P1-201ENST00000431037 1228 ntBASIC15.02■□□□□ -0
TRAF3IP2O43734 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.02■□□□□ -0
TRAF3IP2O43734 PRSS29P-201ENST00000440800 595 ntBASIC15.02■□□□□ -0
TRAF3IP2O43734 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.02■□□□□ -0
TRAF3IP2O43734 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAF3IP2O43734 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 AC099398.1-201ENST00000567919 2776 ntBASIC15.02□□□□□ -0.01
TRAF3IP2O43734 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAF3IP2O43734 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 AL353732.1-201ENST00000569618 1459 ntBASIC15.01□□□□□ -0.01
TRAF3IP2O43734 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 MIR4751-201ENST00000578027 74 ntBASIC15.01□□□□□ -0.01
TRAF3IP2O43734 AC005412.3-201ENST00000580309 715 ntBASIC15.01□□□□□ -0.01
TRAF3IP2O43734 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 AL139011.1-202ENST00000642063 584 ntBASIC15.01□□□□□ -0.01
TRAF3IP2O43734 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 AC092171.3-201ENST00000610122 2651 ntBASIC15.01□□□□□ -0.01
TRAF3IP2O43734 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAF3IP2O43734 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TRAF3IP2O43734 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15□□□□□ -0.01
TRAF3IP2O43734 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
TRAF3IP2O43734 AC131009.4-201ENST00000624048 1740 ntBASIC15□□□□□ -0.01
TRAF3IP2O43734 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
TRAF3IP2O43734 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms