Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ACTN4O43707 PI4KAP1-204ENST00000612579 1703 ntBASIC18.9■□□□□ 0.62
ACTN4O43707 AL512652.2-201ENST00000625156 1716 ntBASIC18.9■□□□□ 0.62
ACTN4O43707 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ACTN4O43707 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ACTN4O43707 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.9■□□□□ 0.62
ACTN4O43707 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ACTN4O43707 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
ACTN4O43707 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
ACTN4O43707 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.89■□□□□ 0.62
ACTN4O43707 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.89■□□□□ 0.62
ACTN4O43707 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 GGT3P-204ENST00000453783 1664 ntBASIC18.89■□□□□ 0.61
ACTN4O43707 SLC22A20-204ENST00000530038 1673 ntBASIC18.89■□□□□ 0.61
ACTN4O43707 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.89■□□□□ 0.61
ACTN4O43707 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 AC073621.1-201ENST00000392730 636 ntBASIC18.89■□□□□ 0.61
ACTN4O43707 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.89■□□□□ 0.61
ACTN4O43707 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.89■□□□□ 0.61
ACTN4O43707 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
ACTN4O43707 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
ACTN4O43707 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.89■□□□□ 0.61
ACTN4O43707 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.89■□□□□ 0.61
ACTN4O43707 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.89■□□□□ 0.61
ACTN4O43707 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ACTN4O43707 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ACTN4O43707 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 OR6D1P-203ENST00000641209 4860 ntBASIC18.88■□□□□ 0.61
ACTN4O43707 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
ACTN4O43707 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.88■□□□□ 0.61
ACTN4O43707 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.88■□□□□ 0.61
ACTN4O43707 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ACTN4O43707 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.88■□□□□ 0.61
ACTN4O43707 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.88■□□□□ 0.61
ACTN4O43707 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.88■□□□□ 0.61
ACTN4O43707 AC006557.2-201ENST00000592985 1240 ntBASIC18.88■□□□□ 0.61
ACTN4O43707 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.88■□□□□ 0.61
ACTN4O43707 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ACTN4O43707 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.88■□□□□ 0.61
ACTN4O43707 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
ACTN4O43707 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.88■□□□□ 0.61
ACTN4O43707 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ACTN4O43707 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.87■□□□□ 0.61
ACTN4O43707 PMS2P1-201ENST00000431037 1228 ntBASIC18.87■□□□□ 0.61
ACTN4O43707 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
ACTN4O43707 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.87■□□□□ 0.61
ACTN4O43707 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms