Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.88■□□□□ 0.13
SPTBN2O15020 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SPTBN2O15020 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.88■□□□□ 0.13
SPTBN2O15020 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SPTBN2O15020 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.88■□□□□ 0.13
SPTBN2O15020 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
SPTBN2O15020 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SPTBN2O15020 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SPTBN2O15020 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.88■□□□□ 0.13
SPTBN2O15020 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SPTBN2O15020 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SPTBN2O15020 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.88■□□□□ 0.13
SPTBN2O15020 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.88■□□□□ 0.13
SPTBN2O15020 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
SPTBN2O15020 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.88■□□□□ 0.13
SPTBN2O15020 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.87■□□□□ 0.13
SPTBN2O15020 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 AC105021.1-202ENST00000570572 669 ntBASIC15.87■□□□□ 0.13
SPTBN2O15020 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.87■□□□□ 0.13
SPTBN2O15020 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SPTBN2O15020 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 AC091046.1-201ENST00000331871 207 ntBASIC15.87■□□□□ 0.13
SPTBN2O15020 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 SLC25A24P2-201ENST00000415059 510 ntBASIC15.87■□□□□ 0.13
SPTBN2O15020 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.87■□□□□ 0.13
SPTBN2O15020 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
SPTBN2O15020 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC15.87■□□□□ 0.13
SPTBN2O15020 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.87■□□□□ 0.13
SPTBN2O15020 AL022328.3-201ENST00000607943 679 ntBASIC15.87■□□□□ 0.13
SPTBN2O15020 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SPTBN2O15020 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.87■□□□□ 0.13
SPTBN2O15020 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 AC135776.1-201ENST00000319817 2481 ntBASIC15.87■□□□□ 0.13
SPTBN2O15020 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SPTBN2O15020 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.86■□□□□ 0.13
SPTBN2O15020 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPTBN2O15020 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPTBN2O15020 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SPTBN2O15020 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.86■□□□□ 0.13
SPTBN2O15020 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.86■□□□□ 0.13
SPTBN2O15020 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.86■□□□□ 0.13
SPTBN2O15020 AC025048.3-201ENST00000590609 569 ntBASIC15.86■□□□□ 0.13
SPTBN2O15020 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPTBN2O15020 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPTBN2O15020 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SPTBN2O15020 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPTBN2O15020 CROCCP3-202ENST00000420820 1947 ntBASIC15.86■□□□□ 0.13
SPTBN2O15020 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPTBN2O15020 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.86■□□□□ 0.13
SPTBN2O15020 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SPTBN2O15020 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms