Protein–RNA interactions for Protein: O00421

CCRL2, C-C chemokine receptor-like 2, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCRL2O00421 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCRL2O00421 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCRL2O00421 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCRL2O00421 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCRL2O00421 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.23■□□□□ 0.03
CCRL2O00421 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.23■□□□□ 0.03
CCRL2O00421 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCRL2O00421 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCRL2O00421 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCRL2O00421 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.23■□□□□ 0.03
CCRL2O00421 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.22■□□□□ 0.03
CCRL2O00421 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.22■□□□□ 0.03
CCRL2O00421 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCRL2O00421 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CCRL2O00421 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.22■□□□□ 0.03
CCRL2O00421 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.22■□□□□ 0.03
CCRL2O00421 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.22■□□□□ 0.03
CCRL2O00421 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.22■□□□□ 0.03
CCRL2O00421 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.22■□□□□ 0.03
CCRL2O00421 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCRL2O00421 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CCRL2O00421 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCRL2O00421 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCRL2O00421 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCRL2O00421 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.21■□□□□ 0.03
CCRL2O00421 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.21■□□□□ 0.03
CCRL2O00421 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.21■□□□□ 0.03
CCRL2O00421 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.21■□□□□ 0.03
CCRL2O00421 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.21■□□□□ 0.03
CCRL2O00421 TSPY15P-201ENST00000457163 923 ntBASIC15.21■□□□□ 0.03
CCRL2O00421 HLA-J-202ENST00000469281 1241 ntBASIC15.21■□□□□ 0.03
CCRL2O00421 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.21■□□□□ 0.03
CCRL2O00421 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.21■□□□□ 0.03
CCRL2O00421 AC109462.3-201ENST00000573934 613 ntBASIC15.21■□□□□ 0.03
CCRL2O00421 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC15.21■□□□□ 0.03
CCRL2O00421 AC019129.2-201ENST00000609837 1235 ntBASIC15.21■□□□□ 0.03
CCRL2O00421 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.21■□□□□ 0.03
CCRL2O00421 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.21■□□□□ 0.03
CCRL2O00421 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.21■□□□□ 0.03
CCRL2O00421 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCRL2O00421 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCRL2O00421 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.21■□□□□ 0.03
CCRL2O00421 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCRL2O00421 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCRL2O00421 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCRL2O00421 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCRL2O00421 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCRL2O00421 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CCRL2O00421 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCRL2O00421 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCRL2O00421 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms